I don't know the exact reasons, but the C-clip eliminator kits on the market are designed for drag racing, etc. and specifically say they're no designed for the side loads a 4x4 sees.
Yes, the 8.8 is a c-clip axle. I've done lots of research and asking for pics of breakage, and have YET to find one that broke AT THE CLIP. Most of the broken shafts I've seen have been in V8 rigs, with big tires (38"+), etc. You're either going to spend big money to buy a D44 OUT of a TJ, or spend some time/money, etc. to get all of the brackets put on the D44 if you're getting like an XJ one for example, or to put the brackets on an 8.8. I've done a dozen or so 8.8 installs in XJ's, YJ's, ZJ, TJ, etc. and all have been very happy. I've run one in my rig for over 5 years /w very good results. Like stated above, weld the tubes and you'll be fine.
My $.02.
PS, I also normally stock a few 8.8's complete. You're in Edgewood, I am in Milton... you're welcome to come and check out my rig, or stop by for a beer and BS session.
John